Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT14307Zinc finger CCHC domain-containing protein 2. (1048 aa)    
Predicted Functional Partners:
KP79_PYT09227
Superkiller viralicidic activity 2-like 2.
   
 0.787
KP79_PYT14509
PAP-associated domain-containing protein 5.
   
 0.707
KP79_PYT01737
DnaJ-like subfamily C member 13.
   
  
 0.669
KP79_PYT03236
Coiled-coil domain-containing protein 9.
   
  
 0.595
KP79_PYT14357
LisH domain-containing protein.
    
 
 0.565
KP79_PYT14356
Uncharacterized protein.
    
 
 0.565
KP79_PYT08674
FGGY carbohydrate kinase domain-containing protein.
      
 0.563
KP79_PYT08875
rRNA-processing protein EBP2.
   
   0.511
KP79_PYT04263
Helicase SKI2W.
   
 0.507
KP79_PYT06883
Centrosomal protein of 85 kDa.
      
 0.484
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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