STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09108Vesicular inhibitory amino acid transporter. (485 aa)    
Predicted Functional Partners:
KP79_PYT23711
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.933
KP79_PYT15823
Uncharacterized protein.
   
 
 0.933
KP79_PYT18868
Cysteine string protein.
    
 0.832
KP79_PYT09694
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.799
KP79_PYT07474
Synaptotagmin-1.
   
 
 0.772
KP79_PYT17921
Vesicle-associated membrane protein 727.
   
 
 0.726
KP79_PYT05517
Vesicular acetylcholine transporter.
      
 0.700
KP79_PYT09157
Ras-related protein Rab-3.
   
 
 0.681
KP79_PYT22613
Ras-related protein Rab-3A.
   
 
 0.681
KP79_PYT19339
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.669
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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