STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09112Cell cycle checkpoint protein RAD17. (710 aa)    
Predicted Functional Partners:
KP79_PYT16437
Replication factor C subunit 2.
    
 0.998
KP79_PYT16719
Replication factor C subunit 5.
   
 0.998
KP79_PYT20615
Replication factor C subunit 4.
   
 0.998
KP79_PYT13100
Replication factor C subunit 3.
   
 0.998
KP79_PYT19891
Cell division cycle-associated 7-like protein.
   
 0.995
KP79_PYT00867
Checkpoint protein; Belongs to the HUS1 family.
   
 0.989
KP79_PYT16431
Cell cycle checkpoint protein RAD1.
   
 0.984
KP79_PYT15427
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 0.960
KP79_PYT22799
ATP-dependent DNA helicase RecS.
   
 0.955
KP79_PYT19025
Werner syndrome ATP-dependent helicase-like.
   
 0.955
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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