Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
KP79_PYT08834Rho GTPase-activating protein 100F. (1051 aa)    
Predicted Functional Partners:
KP79_PYT00499
DNA-directed RNA polymerase II subunit RPB4.
    
   0.895
KP79_PYT08258
Transcription factor glial cells missing.
      
 0.743
KP79_PYT11479
Ras-like GTP-binding protein RHO.
    
 0.734
KP79_PYT18455
Protein kinase C and casein kinase substrate in neurons protein 2.
   
  
 0.720
KP79_PYT15106
ELKS/Rab6-interacting/CAST family member 1.
    
 
 0.701
KP79_PYT11278
ERC protein 2.
    
 
 0.701
KP79_PYT23575
DDB1-and CUL4-associated factor 13.
      
 0.696
KP79_PYT04782
Uncharacterized protein.
      
 0.654
KP79_PYT18273
Adapter molecule Crk.
      
 0.606
KP79_PYT12704
FCH and double SH3 domains protein 2.
     
 0.582
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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