STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT09134Defense protein. (223 aa)    
Predicted Functional Partners:
KP79_PYT11947
39S ribosomal protein L46, mitochondrial.
   
   0.570
KP79_PYT06990
39S ribosomal protein L23, mitochondrial.
   
 
 0.570
KP79_PYT13438
39S ribosomal protein L3, mitochondrial.
   
   0.550
KP79_PYT07878
39S ribosomal protein L19, mitochondrial.
   
 
 0.523
KP79_PYT12755
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.516
KP79_PYT05437
39S ribosomal protein L27, mitochondrial.
   
 
 0.515
KP79_PYT03203
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
   0.511
KP79_PYT01968
28S ribosomal protein S15, mitochondrial.
   
   0.508
KP79_PYT10466
39S ribosomal protein L4, mitochondrial.
   
 
 0.507
KP79_PYT21964
39S ribosomal protein L41, mitochondrial.
   
 
 0.501
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.