Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT25257C-type lectin domain family 4 member F. (168 aa)    
Predicted Functional Partners:
KP79_PYT03860
Parafibromin.
   
 0.676
KP79_PYT09358
RNA polymerase II-associated factor 1-like.
   
 0.619
KP79_PYT14164
Chromodomain Y-like protein.
    
 
 0.601
KP79_PYT18097
RNA polymerase-associated protein CTR9-like.
   
 0.490
KP79_PYT18098
RNA polymerase-associated protein CTR9-like.
   
 0.490
KP79_PYT09566
Cyclin-dependent kinase 2-interacting protein.
   
 0.490
KP79_PYT09934
RNA polymerase-associated protein RTF1-like.
    
 0.485
KP79_PYT13792
Aurora kinase A-A; Belongs to the protein kinase superfamily.
    
 
 0.430
KP79_PYT13790
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.430
KP79_PYT13791
Aurora kinase A-A; Belongs to the protein kinase superfamily.
    
 
 0.430
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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