KP79_PYT19407 protein (Mizuhopecten yessoensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KP79_PYT19407

Ankyrin repeat and zinc finger domain-containing protein 1. (667 aa)

Predicted Functional Partners:

KP79_PYT10695

0.928

KP79_PYT21726

0.789

KP79_PYT16027

0.746

KP79_PYT03903

0.719

KP79_PYT13862

0.717

KP79_PYT08801

0.704

KP79_PYT01776

0.704

KP79_PYT13278

0.704

KP79_PYT17041

0.685

KP79_PYT09279

0.667

Your Current Organism:

Mizuhopecten yessoensis

NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KP79_PYT01776	KP79_PYT08801	A0A210Q5J1	A0A210PNZ3	Spermatogenesis-associated protein 5-like protein 1.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.590
KP79_PYT01776	KP79_PYT09279	A0A210Q5J1	A0A210R1R0	Spermatogenesis-associated protein 5-like protein 1.	Phospholipase A-2-activating protein.	0.721
KP79_PYT01776	KP79_PYT10695	A0A210Q5J1	A0A210QP26	Spermatogenesis-associated protein 5-like protein 1.	Nuclear export mediator factor Nemf.	0.686
KP79_PYT01776	KP79_PYT13862	A0A210Q5J1	A0A210PGK9	Spermatogenesis-associated protein 5-like protein 1.	Transcription factor 25.	0.789
KP79_PYT01776	KP79_PYT16027	A0A210Q5J1	A0A210PX06	Spermatogenesis-associated protein 5-like protein 1.	Ubiquitin fusion degradation protein 1-like.	0.960
KP79_PYT01776	KP79_PYT17041	A0A210Q5J1	A0A210R1Y9	Spermatogenesis-associated protein 5-like protein 1.	RING finger protein 37.	0.680
KP79_PYT01776	KP79_PYT19407	A0A210Q5J1	A0A210PP30	Spermatogenesis-associated protein 5-like protein 1.	Ankyrin repeat and zinc finger domain-containing protein 1.	0.704
KP79_PYT01776	KP79_PYT21726	A0A210Q5J1	A0A210R349	Spermatogenesis-associated protein 5-like protein 1.	Ubiquitin conjugation factor E4 B.	0.800
KP79_PYT03903	KP79_PYT19407	A0A210PFS0	A0A210PP30	Zinc phosphodiesterase ELAC protein 1.	Ankyrin repeat and zinc finger domain-containing protein 1.	0.719
KP79_PYT08801	KP79_PYT01776	A0A210PNZ3	A0A210Q5J1	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Spermatogenesis-associated protein 5-like protein 1.	0.590
KP79_PYT08801	KP79_PYT09279	A0A210PNZ3	A0A210R1R0	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Phospholipase A-2-activating protein.	0.721
KP79_PYT08801	KP79_PYT10695	A0A210PNZ3	A0A210QP26	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Nuclear export mediator factor Nemf.	0.686
KP79_PYT08801	KP79_PYT13862	A0A210PNZ3	A0A210PGK9	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Transcription factor 25.	0.789
KP79_PYT08801	KP79_PYT16027	A0A210PNZ3	A0A210PX06	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Ubiquitin fusion degradation protein 1-like.	0.960
KP79_PYT08801	KP79_PYT17041	A0A210PNZ3	A0A210R1Y9	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	RING finger protein 37.	0.680
KP79_PYT08801	KP79_PYT19407	A0A210PNZ3	A0A210PP30	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Ankyrin repeat and zinc finger domain-containing protein 1.	0.704
KP79_PYT08801	KP79_PYT21726	A0A210PNZ3	A0A210R349	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Ubiquitin conjugation factor E4 B.	0.800
KP79_PYT09279	KP79_PYT01776	A0A210R1R0	A0A210Q5J1	Phospholipase A-2-activating protein.	Spermatogenesis-associated protein 5-like protein 1.	0.721
KP79_PYT09279	KP79_PYT08801	A0A210R1R0	A0A210PNZ3	Phospholipase A-2-activating protein.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.721
KP79_PYT09279	KP79_PYT13278	A0A210R1R0	A0A210R3C6	Phospholipase A-2-activating protein.	Spermatogenesis-associated protein 5.	0.721