Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT17206Nuclear receptor-binding factor 2. (288 aa)    
Predicted Functional Partners:
KP79_PYT14967
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.995
KP79_PYT21150
Beclin-1.
    
 0.990
KP79_PYT21476
Phosphoinositide 3-kinase regulatory subunit 4.
    
 
 0.973
KP79_PYT08257
RB1-inducible coiled-coil protein 1.
    
 
 0.961
KP79_PYT16334
Serine/threonine-protein kinase unc-51.
    
 
 0.842
KP79_PYT12955
Autophagy-related protein 101.
      
 0.606
KP79_PYT18984
UPF0415 protein C7orf25-like.
      
 0.584
KP79_PYT10660
E3 ubiquitin-protein ligase HECTD1.
    
   0.567
KP79_PYT23816
Protein SOGA2.
    
   0.538
KP79_PYT23817
Protein SOGA3.
    
   0.538
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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