Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT17217Poly [ADP-ribose] polymerase. (3101 aa)    
Predicted Functional Partners:
KP79_PYT04980
Ubiquitin-conjugating enzyme E2 Z.
   
   0.557
KP79_PYT17091
E3 ubiquitin-protein ligase DTX3.
   
 
 0.541
KP79_PYT17603
E3 ubiquitin-protein ligase DTX3L.
   
 
 0.541
KP79_PYT17692
E3 ubiquitin-protein ligase DTX3.
   
 
 0.541
KP79_PYT23942
E3 ubiquitin-protein ligase DTX3.
   
 
 0.541
KP79_PYT23478
E3 ubiquitin-protein ligase DTX3L.
   
 
 0.541
KP79_PYT20249
Reticulocyte-binding protein 2-like a.
   
  
 0.406
KP79_PYT22007
Poly [ADP-ribose] polymerase.
    
 
 0.404
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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