Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KP79_PYT17280Spermine oxidase. (983 aa)    
Predicted Functional Partners:
KP79_PYT21463
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.959
KP79_PYT16621
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.959
KP79_PYT24039
Polyamine oxidase 4.
  
  
0.922
KP79_PYT22653
Spermine oxidase.
  
  
 
0.912
KP79_PYT05928
Spermine oxidase.
  
  
 
0.908
KP79_PYT07397
Amine oxidase.
     
 0.902
KP79_PYT23019
Spermine synthase.
     
 0.861
KP79_PYT18435
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.658
KP79_PYT19144
4-trimethylaminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
  0.650
KP79_PYT15105
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
     
  0.650
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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