Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT17285Ankyrin-1. (343 aa)    
Predicted Functional Partners:
KP79_PYT16167
Protein fem-1-like C.
  
 
  0.526
KP79_PYT11541
Protein fem-1-like C.
  
 
  0.519
KP79_PYT19866
Ankyrin repeat and SOCS box protein 2.
  
     0.505
KP79_PYT13955
Ankyrin repeat protein.
  
 
  0.504
KP79_PYT09468
Protein fem-1-like C.
  
 
  0.498
KP79_PYT11178
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.
  
     0.497
KP79_PYT20090
Ankyrin repeat domain-containing protein 39.
  
     0.489
KP79_PYT12675
Nuclear pore complex protein Nup54.
      
 0.484
KP79_PYT08357
Programmed cell death protein 2.
    
 
 0.484
KP79_PYT17243
Protein fem-1-like C.
  
 
  0.480
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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