STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17770Protein BCCIP homolog; Belongs to the BCP1 family. (297 aa)    
Predicted Functional Partners:
KP79_PYT06659
Ribosome production factor 2-like.
   
  
 0.821
KP79_PYT08529
Ribosome biogenesis protein BRX1-like.
   
    0.796
KP79_PYT04876
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
    0.781
KP79_PYT08875
rRNA-processing protein EBP2.
   
    0.774
KP79_PYT14893
Breast cancer type 2 susceptibility protein-like.
    
 
 0.745
KP79_PYT02397
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.740
KP79_PYT04306
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.740
KP79_PYT22268
Sulfite oxidase, mitochondrial.
      
 0.731
KP79_PYT24044
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.714
KP79_PYT11025
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.692
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.