Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT17749Hermansky-Pudlak syndrome 1 protein-like. (737 aa)    
Predicted Functional Partners:
KP79_PYT16765
Hermansky-Pudlak syndrome 4 protein.
    
 0.992
KP79_PYT08815
Hermansky-Pudlak syndrome 6 protein-like.
     
 0.766
KP79_PYT21376
Hermansky-Pudlak syndrome 3 protein-like.
      
 0.743
KP79_PYT16203
4-hydroxyphenylpyruvate dioxygenase.
     
 0.634
KP79_PYT17323
4-hydroxyphenylpyruvate dioxygenase-like protein.
     
 0.634
KP79_PYT22736
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.
     
 0.619
KP79_PYT07686
Biogenesis of lysosome-related organelles complex 1 subunit 3.
     
 0.591
KP79_PYT05819
AP-4 complex accessory subunit tepsin.
      
 0.567
KP79_PYT23402
Biogenesis of lysosome-related organelles complex 1 subunit 5.
     
 0.563
KP79_PYT19028
Biogenesis of lysosome-related organelles complex 1 subunit 1.
   
 
  0.560
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.