Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT12162CD109. (1440 aa)    
Predicted Functional Partners:
KP79_PYT07182
Polycomb protein SCMH1.
    
 0.738
KP79_PYT05659
E3 ubiquitin-protein ligase RING2.
    
 0.720
KP79_PYT05456
Chromobox protein-like 7.
    
 0.525
KP79_PYT19762
Polycomb complex protein BMI-1.
    
 0.508
KP79_PYT19764
Polycomb complex protein BMI-1.
    
 0.508
KP79_PYT19763
Polycomb complex protein BMI-1.
    
 0.508
KP79_PYT15560
Postreplication repair E3 ubiquitin-protein ligase RAD18.
    
 0.472
KP79_PYT11224
Scm-like with four MBT domains protein 1.
    
  0.404
KP79_PYT09044
Lethal(3)malignant brain tumor-like protein 1.
    
  0.404
KP79_PYT12941
MBT domain-containing protein 1.
    
  0.404
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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