Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
KP79_PYT23164High mobility group protein 20A. (340 aa)    
Predicted Functional Partners:
KP79_PYT18221
PHD finger protein 21A.
    
 0.982
KP79_PYT07578
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
   
 0.981
KP79_PYT04904
PHD finger protein 14.
   
 
 0.969
KP79_PYT09413
REST corepressor 3.
   
 0.897
KP79_PYT11224
Scm-like with four MBT domains protein 1.
    
 
 0.731
KP79_PYT05014
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.729
KP79_PYT02267
Dystrobrevin beta.
    
 
 0.696
KP79_PYT08074
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.684
KP79_PYT08179
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.684
KP79_PYT05646
Transcription factor 20.
   
 
 0.661
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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