Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT07594Testis-expressed sequence 11 protein. (927 aa)    
Predicted Functional Partners:
KP79_PYT09203
Uncharacterized protein C9orf84.
    
 
 0.760
KP79_PYT23513
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
      
 0.755
KP79_PYT06693
CEP209_CC5 domain-containing protein.
      
 0.740
KP79_PYT18300
HORMA domain-containing protein 1.
   
 
 0.730
KP79_PYT08491
MutS protein-like 4.
   
  
 0.725
KP79_PYT05617
DUF3715 domain-containing protein.
      
 0.725
KP79_PYT21668
Protein MEF2BNB.
    
   0.711
KP79_PYT02253
MutS protein-like 5.
   
  
 0.659
KP79_PYT12497
MCM domain-containing protein 2.
   
  
 0.647
KP79_PYT21376
Hermansky-Pudlak syndrome 3 protein-like.
      
 0.631
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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