Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT22000Ankyrin repeat and SAM domain-containing protein 3. (992 aa)    
Predicted Functional Partners:
KP79_PYT14268
Ankyrin repeat and SAM domain-containing protein 6.
  
 
 
0.981
KP79_PYT04568
Serine/threonine-protein kinase Nek7; Belongs to the protein kinase superfamily.
    
 
 0.963
KP79_PYT12888
Xaa-Pro aminopeptidase 3.
      
 0.726
KP79_PYT19885
WD repeat-containing protein 24.
   
  
 0.638
KP79_PYT17822
Protein RMD5-like A.
      
 0.629
KP79_PYT05779
WD repeat-containing protein 90.
    
 
 0.605
KP79_PYT12910
Rho GTPase-activating protein 6.
      
 0.596
KP79_PYT10006
Nephrocystin-1.
    
 0.580
KP79_PYT06242
Leucine-rich repeat-containing protein 45.
   
   0.536
KP79_PYT20677
Conserved oligomeric Golgi complex subunit 3.
     
 0.522
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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