Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT25217Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
KP79_PYT07684
M-phase phosphoprotein 8.
   
 
 0.921
KP79_PYT06052
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.779
KP79_PYT18095
Cytoskeleton-associated protein 5.
   
 0.769
KP79_PYT05647
Mitotic spindle assembly checkpoint protein MAD1.
    
 0.720
KP79_PYT17221
Mitotic checkpoint protein BUB3.
   
 0.700
KP79_PYT17776
Protein regulator of cytokinesis 1.
   
 
 0.671
KP79_PYT19614
Dynactin subunit 2-A.
    
 0.657
KP79_PYT00781
WD repeat-containing protein 67.
    
 0.645
KP79_PYT04489
CLIP-associating protein 1.
    
 0.637
KP79_PYT16073
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes.
    
 0.627
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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