Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT08936Centromere protein C 1. (1733 aa)    
Predicted Functional Partners:
KP79_PYT17831
Protein MIS12-like.
    
 
 0.949
KP79_PYT16587
Centromere protein M.
    
 0.942
KP79_PYT20701
Centromere protein I.
    
 0.929
KP79_PYT09200
Centromere protein K.
    
 0.920
KP79_PYT23642
Centromere protein O.
    
 0.902
KP79_PYT12030
Centromere protein P.
    
 0.866
KP79_PYT13826
Centromere protein N.
     
 0.851
KP79_PYT06357
Kinetochore protein Nuf2-B.
    
 
 0.829
KP79_PYT17455
Centromere protein S.
    
 0.756
KP79_PYT15262
Uncharacterized protein.
    
 
 0.701
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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