Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT15136Programmed cell death protein 7. (602 aa)    
Predicted Functional Partners:
KP79_PYT23600
U11/U12 small nuclear ribonucleoprotein 25 kDa protein.
    
 0.986
KP79_PYT02278
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
    
 0.979
KP79_PYT12680
Zinc finger matrin-type protein 5.
   
 0.976
KP79_PYT20205
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1.
    
  0.948
KP79_PYT11570
Small nuclear ribonucleoprotein F.
    
  0.888
KP79_PYT10088
Small nuclear ribonucleoprotein Sm D2.
    
  0.848
KP79_PYT18302
U1 small nuclear ribonucleoprotein 70 kDa.
   
 0.847
KP79_PYT15347
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 0.847
KP79_PYT16684
Uncharacterized protein.
    
  0.814
KP79_PYT06762
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.814
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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