Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KP79_PYT19798Small ubiquitin-related modifier. (106 aa)    
Predicted Functional Partners:
KP79_PYT06161
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.999
KP79_PYT13688
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.998
KP79_PYT03076
E3 SUMO-protein ligase PIAS2.
    
 0.998
KP79_PYT10467
SUMO-activating enzyme subunit 1.
   
 0.996
KP79_PYT12685
Ran GTPase-activating protein 1.
    
 0.995
KP79_PYT19310
Sentrin-specific protease 1.
   
 0.995
KP79_PYT12771
RANBP2-like and GRIP domain-containing protein 8.
   
 0.988
KP79_PYT12942
Small ubiquitin-related modifier.
  
0.980
KP79_PYT17745
E3 ubiquitin-protein ligase RNF4.
    
 
 0.978
KP79_PYT11726
G/T mismatch-specific thymine DNA glycosylase.
   
 0.970
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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