Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT1514028S ribosomal protein S29, mitochondrial. (472 aa)    
Predicted Functional Partners:
KP79_PYT21591
28S ribosomal protein S22, mitochondrial.
   
 0.999
KP79_PYT06821
28S ribosomal protein S9, mitochondrial.
   
 0.999
KP79_PYT10010
28S ribosomal protein S10, mitochondrial.
   
 0.999
KP79_PYT09478
28S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
KP79_PYT15423
28S ribosomal protein S27, mitochondrial.
   
 0.998
KP79_PYT01968
28S ribosomal protein S15, mitochondrial.
   
 0.998
KP79_PYT06632
28S ribosomal protein S35, mitochondrial.
   
 0.998
KP79_PYT22338
28S ribosomal protein S31, mitochondrial.
   
 0.997
KP79_PYT14670
28S ribosomal protein S16, mitochondrial.
   
 0.997
KP79_PYT05439
28S ribosomal protein S7, mitochondrial.
   
 0.996
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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