Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT15121Zinc finger MYND domain-containing protein 15. (659 aa)    
Predicted Functional Partners:
KP79_PYT10770
ATP-dependent RNA helicase TDRD9.
      
 0.621
KP79_PYT07594
Testis-expressed sequence 11 protein.
      
 0.621
KP79_PYT13822
Transcription initiation factor TFIID subunit 4.
      
 0.621
KP79_PYT09158
Uncharacterized protein.
    
 0.574
KP79_PYT20164
Lysine-specific demethylase 6A.
    
 0.537
KP79_PYT21244
Tumor protein 63.
    
  0.518
KP79_PYT07684
M-phase phosphoprotein 8.
    
 0.467
KP79_PYT05184
Polycomb protein Suz12.
    
 0.409
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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