Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT03926Ankyrin repeat and SOCS box protein 12. (308 aa)    
Predicted Functional Partners:
KP79_PYT07757
Cullin-5; Belongs to the cullin family.
    
 0.969
KP79_PYT16662
Transcription elongation factor B polypeptide 2.
    
 0.938
KP79_PYT08120
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.840
KP79_PYT20855
Uncharacterized protein.
    
 0.656
TRAF3IP1
TRAF3-interacting protein 1.
    
 0.628
KP79_PYT00530
Transducin beta-like protein 2.
    
 0.581
KP79_PYT17076
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.568
KP79_PYT11541
Protein fem-1-like C.
  
 
  0.519
KP79_PYT23810
Cullin-associated NEDD8-dissociated protein 1.
    
  0.517
KP79_PYT14386
Neural cell expressed developmentally down-regulated protein 8.
    
 0.514
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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