STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT20304Protein FAM83H. (212 aa)    
Predicted Functional Partners:
KP79_PYT20807
Uncharacterized protein.
   
 0.752
KP79_PYT07136
Smad nuclear-interacting protein 1.
   
 0.744
KP79_PYT24465
Pre-mRNA-splicing factor CWC22-like.
   
 
 0.620
KP79_PYT11262
G patch domain and KOW motifs-containing protein.
   
 
 0.600
KP79_PYT07685
Splicing factor 3A subunit 3.
   
 
 0.590
KP79_PYT04024
RING finger protein 113A.
    
 
 0.585
KP79_PYT05295
PHD finger-like domain-containing protein 5A.
    
 
 0.584
KP79_PYT08289
Peptidyl-prolyl cis-trans isomerase CWC27-like.
    
 0.584
KP79_PYT10415
Splicing factor 3B subunit 2.
    
 
 0.581
KP79_PYT04385
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
   
 0.581
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.