Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
KP79_PYT11787Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (775 aa)    
Predicted Functional Partners:
KP79_PYT11373
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
KP79_PYT04479
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
KP79_PYT13030
Arginine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
KP79_PYT09716
Bifunctional glutamate/proline--tRNA ligase.
 
 0.999
KP79_PYT13956
Lysine--tRNA ligase.
  
 0.999
KP79_PYT07321
Tyrosine--tRNA ligase.
  
 0.998
KP79_PYT05220
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2.
   
 0.998
KP79_PYT04902
Aspartate--tRNA ligase, cytoplasmic.
  
 0.997
KP79_PYT09104
Eukaryotic translation elongation factor 1 epsilon-1.
   
 0.997
KP79_PYT13145
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1.
 
 0.997
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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