Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT19885WD repeat-containing protein 24. (776 aa)    
Predicted Functional Partners:
KP79_PYT19694
WD repeat-containing protein mio-B.
    
0.999
KP79_PYT15976
DEP domain-containing protein 5.
   
 0.999
KP79_PYT11849
Nitrogen permease regulator 2-like protein.
    
 0.999
KP79_PYT13915
WD repeat-containing protein 59.
   
0.999
KP79_PYT11199
Protein SEC13-like; Belongs to the WD repeat SEC13 family.
    
 0.999
KP79_PYT13430
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.999
KP79_PYT05286
Nitrogen permease regulator 3-like protein.
    
 0.996
KP79_PYT23863
UPF0536 protein C12orf66.
    
 0.993
KP79_PYT04865
Integrin-alpha FG-GAP repeat-containing protein 2.
    
 0.988
KP79_PYT09871
Kaptin.
   
 0.987
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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