STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT05283Ubiquitin-conjugating enzyme E2 O. (1247 aa)    
Predicted Functional Partners:
KP79_PYT20483
E3 ubiquitin-protein ligase TRIP12.
   
 0.836
KP79_PYT16211
Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
     
0.803
KP79_PYT11219
Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.745
KP79_PYT24524
Ubiquitin-like modifier-activating enzyme 5.
   
 0.725
KP79_PYT11624
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.720
KP79_PYT10930
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.713
KP79_PYT11349
Ubiquitin-like modifier-activating enzyme 1.
  
 0.699
KP79_PYT14746
Ubiquitin-like modifier-activating enzyme 6.
  
 0.699
KP79_PYT03955
Ubiquitin-60S ribosomal protein L40.
   
 0.696
KP79_PYT08079
Ubiquitin-conjugating enzyme E2 W-A.
     
 0.680
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.