Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT19831D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (533 aa)    
Predicted Functional Partners:
KP79_PYT22897
Phosphoserine aminotransferase.
  
 0.999
KP79_PYT12021
Phosphoserine phosphatase, chloroplastic.
  
 0.935
KP79_PYT17077
Phosphoglycerate mutase.
    
 0.907
KP79_PYT04662
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.851
KP79_PYT05857
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.851
KP79_PYT23084
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.826
KP79_PYT11028
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.826
KP79_PYT08182
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.826
KP79_PYT08228
Coiled-coil and C2 domain-containing protein 1-like.
      
 0.806
KP79_PYT21544
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.789
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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