Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT19867E3 ubiquitin-protein ligase ZSWIM2. (867 aa)    
Predicted Functional Partners:
KP79_PYT12090
Uncharacterized protein.
    
 
 0.709
KP79_PYT11842
Transketolase.
   
 
 0.627
KP79_PYT14430
Translin-associated factor X-interacting protein 1.
      
 0.622
KP79_PYT01323
Rhabdoid tumor deletion region protein 1.
      
 0.622
KP79_PYT00134
Zinc finger SWIM domain-containing protein 7.
      
 0.608
KP79_PYT17455
Centromere protein S.
      
 0.571
KP79_PYT22493
Cell adhesion molecule 3.
    
   0.569
KP79_PYT03309
UBX domain-containing protein 7.
   
   0.565
KP79_PYT21534
Uncharacterized protein.
      
 0.554
KP79_PYT03955
Ubiquitin-60S ribosomal protein L40.
    
 0.551
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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