Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT19848Malate dehydrogenase. (367 aa)    
Predicted Functional Partners:
KP79_PYT21332
Fumarate hydratase class I, aerobic.
    
 0.632
KP79_PYT19632
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.613
KP79_PYT16907
Xylulose kinase.
    
 0.604
KP79_PYT12772
Malate synthase.
    
  0.596
KP79_PYT23084
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.561
KP79_PYT10809
Fumarate hydratase, mitochondrial.
    
 0.467
KP79_PYT13465
Aspartate aminotransferase.
     
 0.459
KP79_PYT17545
Aspartate aminotransferase.
     
 0.458
KP79_PYT07440
Acetyl-CoA carboxylase.
    
 0.457
KP79_PYT06701
Uncharacterized protein.
    
 0.447
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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