Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT19862Uncharacterized protein. (1043 aa)    
Predicted Functional Partners:
KP79_PYT12831
Sorting nexin-25.
      
 0.748
KP79_PYT03236
Coiled-coil domain-containing protein 9.
    
 
 0.727
KP79_PYT14421
Ras-related protein Rab-22A.
     
 0.702
KP79_PYT00602
RNA-binding protein 33.
      
 0.695
KP79_PYT06317
GTP-binding protein 1.
      
 0.693
KP79_PYT24406
Tubulin polyglutamylase complex subunit 1.
      
 0.680
KP79_PYT18588
Forkhead box protein N4.
    
 
 0.673
KP79_PYT23231
Pogo transposable element with ZNF domain.
      
 0.663
KP79_PYT21727
Solute carrier family 35 member E2.
      
 0.623
KP79_PYT23816
Protein SOGA2.
      
 0.461
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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