STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT11112Protein rolling stone. (298 aa)    
Predicted Functional Partners:
KP79_PYT03254
Ras-related GTP-binding protein A.
   
 0.552
KP79_PYT06444
Ragulator complex protein LAMTOR2.
    
 0.539
KP79_PYT23711
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.520
KP79_PYT15823
Uncharacterized protein.
   
 
 0.520
KP79_PYT12267
Ragulator complex protein LAMTOR1.
    
 0.498
KP79_PYT02172
Ragulator complex protein LAMTOR5-like.
    
 0.492
KP79_PYT00315
Ras-related GTP-binding protein D.
    
 0.482
KP79_PYT20844
Ragulator complex protein LAMTOR4.
    
 0.453
KP79_PYT14446
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.426
KP79_PYT17539
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.400
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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