Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT25181Kelch-like protein 18. (571 aa)    
Predicted Functional Partners:
KP79_PYT20805
Cullin-3-A; Belongs to the cullin family.
    
 0.896
KP79_PYT13301
Sequestosome-1.
    
 0.848
KP79_PYT05005
Nuclear factor erythroid 2-related factor 2.
    
 0.824
KP79_PYT16401
Serine/threonine-protein phosphatase PGAM5, mitochondrial.
    
 
 0.621
KP79_PYT10593
Dipeptidyl peptidase 3.
   
 0.602
KP79_PYT24355
Protein PTHB1.
    
 0.601
KP79_PYT18070
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.598
KP79_PYT13421
Bardet-Biedl syndrome 4 protein.
    
 0.598
KP79_PYT23411
DNA helicase; Belongs to the MCM family.
    
 
 0.586
KP79_PYT07453
Sestrin-1.
    
 0.573
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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