Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT16550Dynein light chain. (89 aa)    
Predicted Functional Partners:
KP79_PYT03922
Cytoplasmic dynein 1 intermediate chain 2.
   
 0.904
KP79_PYT13426
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 0.826
KP79_PYT06605
Dynein light chain Tctex-type 1.
   
 0.814
KP79_PYT17042
WD repeat-containing protein 34.
    
 0.773
KP79_PYT20762
Tctex1 domain-containing protein 2.
    
 0.760
KP79_PYT14052
Dynein light chain roadblock.
   
 0.718
KP79_PYT18560
Dynein light chain roadblock.
   
 0.718
KP79_PYT04120
WD repeat-containing protein 60.
    
 0.712
KP79_PYT01684
Tctex1 domain-containing protein 1-A.
    
 0.696
KP79_PYT06980
Tctex1 domain-containing protein 1-A.
    
 0.695
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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