Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KP79_PYT05986 | KP79_PYT06469 | A0A210PFG8 | A0A210QW74 | Serine/arginine-rich splicing factor 2. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.929 |
KP79_PYT05986 | KP79_PYT09630 | A0A210PFG8 | A0A210QRS5 | Serine/arginine-rich splicing factor 2. | Serine/arginine-rich splicing factor 4. | 0.880 |
KP79_PYT05986 | KP79_PYT14465 | A0A210PFG8 | A0A210QHF4 | Serine/arginine-rich splicing factor 2. | Polyadenylate-binding protein 2. | 0.866 |
KP79_PYT05986 | KP79_PYT14782 | A0A210PFG8 | A0A210QI18 | Serine/arginine-rich splicing factor 2. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.706 |
KP79_PYT05986 | KP79_PYT16555 | A0A210PFG8 | A0A210PTG4 | Serine/arginine-rich splicing factor 2. | Serine/arginine-rich splicing factor 1. | 0.970 |
KP79_PYT05986 | KP79_PYT16556 | A0A210PFG8 | A0A210PTK4 | Serine/arginine-rich splicing factor 2. | Serine/arginine-rich splicing factor 1. | 0.956 |
KP79_PYT05986 | KP79_PYT18894 | A0A210PFG8 | A0A210QZF0 | Serine/arginine-rich splicing factor 2. | Serine/arginine-rich splicing factor 7. | 0.837 |
KP79_PYT05986 | KP79_PYT18895 | A0A210PFG8 | A0A210QZF8 | Serine/arginine-rich splicing factor 2. | Serine/arginine-rich splicing factor 7. | 0.837 |
KP79_PYT05986 | KP79_PYT18922 | A0A210PFG8 | A0A210QZM7 | Serine/arginine-rich splicing factor 2. | Serine/arginine-rich splicing factor 3. | 0.983 |
KP79_PYT05986 | KP79_PYT19418 | A0A210PFG8 | A0A210PP03 | Serine/arginine-rich splicing factor 2. | Transformer-2 protein-like alpha. | 0.910 |
KP79_PYT06469 | KP79_PYT05986 | A0A210QW74 | A0A210PFG8 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 2. | 0.929 |
KP79_PYT06469 | KP79_PYT09630 | A0A210QW74 | A0A210QRS5 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 4. | 0.959 |
KP79_PYT06469 | KP79_PYT14465 | A0A210QW74 | A0A210QHF4 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Polyadenylate-binding protein 2. | 0.916 |
KP79_PYT06469 | KP79_PYT14782 | A0A210QW74 | A0A210QI18 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.648 |
KP79_PYT06469 | KP79_PYT16555 | A0A210QW74 | A0A210PTG4 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 1. | 0.937 |
KP79_PYT06469 | KP79_PYT16556 | A0A210QW74 | A0A210PTK4 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 1. | 0.846 |
KP79_PYT06469 | KP79_PYT18894 | A0A210QW74 | A0A210QZF0 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 7. | 0.742 |
KP79_PYT06469 | KP79_PYT18895 | A0A210QW74 | A0A210QZF8 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 7. | 0.742 |
KP79_PYT06469 | KP79_PYT18922 | A0A210QW74 | A0A210QZM7 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Serine/arginine-rich splicing factor 3. | 0.928 |
KP79_PYT06469 | KP79_PYT19418 | A0A210QW74 | A0A210PP03 | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | Transformer-2 protein-like alpha. | 0.556 |
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