STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT20133IQ domain-containing protein G. (394 aa)    
Predicted Functional Partners:
KP79_PYT03281
Tubulin polyglutamylase TTLL5.
      
 0.639
KP79_PYT01323
Rhabdoid tumor deletion region protein 1.
   
    0.549
KP79_PYT05716
Leucine-rich repeat-containing protein 48.
   
  
 0.542
KP79_PYT07719
Coiled-coil domain-containing protein 83.
   
  
 0.532
KP79_PYT23811
Gamma-tubulin complex component.
      
 0.523
KP79_PYT09569
T-complex-associated testis-expressed protein 1.
      
 0.521
KP79_PYT08030
Transcription initiation factor TFIID subunit 2.
      
 0.444
KP79_PYT11312
F-box/LRR-repeat protein 13.
      
 0.436
KP79_PYT13616
Growth arrest-specific protein 8.
      
 0.414
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.