STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT06160Solute carrier family 25 member 38-B; Belongs to the mitochondrial carrier (TC 2.A.29) family. (279 aa)    
Predicted Functional Partners:
KP79_PYT17336
Uroporphyrinogen-III synthase.
   
  
 0.586
KP79_PYT09925
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
      
 0.569
KP79_PYT11975
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
      
 0.565
KP79_PYT19804
ATP-binding cassette sub-family B member 6, mitochondrial.
      
 0.557
KP79_PYT03950
Uncharacterized protein.
      
 0.556
KP79_PYT11211
S-adenosylmethionine mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
0.552
KP79_PYT08728
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
      
 0.542
KP79_PYT07352
Coproporphyrinogen-III oxidase.
      
 0.448
KP79_PYT23094
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.445
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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