Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT0427940S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (205 aa)    
Predicted Functional Partners:
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
KP79_PYT06049
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.997
KP79_PYT18404
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.996
KP79_PYT05179
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.996
KP79_PYT08893
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.996
KP79_PYT00299
40S ribosomal protein S29.
  
 0.996
KP79_PYT18109
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.995
KP79_PYT12227
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
KP79_PYT15546
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.995
KP79_PYT23830
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.995
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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