STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT19718Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (438 aa)    
Predicted Functional Partners:
KP79_PYT11431
DNA repair protein complementing XP-C cell.
    
 0.714
KP79_PYT20122
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
   
 0.663
KP79_PYT08391
UV excision repair protein RAD23-like B.
   
 0.601
KP79_PYT14090
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
   
 
 0.582
KP79_PYT17349
Protein SFI1-like.
    
 
 0.579
KP79_PYT25912
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.565
KP79_PYT08829
Serine/threonine-protein kinase pats1.
    
 0.565
KP79_PYT23756
Cyclic GMP-binding protein C.
    
 0.565
KP79_PYT02164
Cyclic GMP-binding protein C.
    
 0.565
KP79_PYT16396
Serine/threonine-protein kinase pats1.
    
 0.565
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.