Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT22656Nuclear RNA export factor 1. (675 aa)    
Predicted Functional Partners:
KP79_PYT21519
Uncharacterized protein.
    
 0.998
KP79_PYT12770
NTF2-related export protein 2.
    
 0.998
KP79_PYT00438
S-antigen protein.
    
 0.998
KP79_PYT05712
THO complex subunit 4-A.
    
 0.996
KP79_PYT11014
Uncharacterized protein.
    
 0.995
KP79_PYT07969
mRNA export factor.
    
 0.993
KP79_PYT04569
Nuclear pore complex protein Nup214.
   
 0.989
KP79_PYT13267
Nuclear pore complex protein Nup98-Nup96.
   
 0.986
KP79_PYT05241
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.982
KP79_PYT17769
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.980
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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