Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT22665Tubulin--tyrosine ligase. (199 aa)    
Predicted Functional Partners:
KP79_PYT01307
Tubulin--tyrosine ligase.
 
     0.932
KP79_PYT24406
Tubulin polyglutamylase complex subunit 1.
    
 0.686
KP79_PYT11455
Nicolin-1.
   
 0.683
KP79_PYT15266
Tubulin polyglutamylase complex subunit 2.
   
  0.668
KP79_PYT13596
Vasohibin-2.
      
 0.625
KP79_PYT21650
Coiled-coil domain-containing protein 23.
      
 0.617
KP79_PYT12507
TBC1 domain family member 19.
   
 
 0.583
KP79_PYT16858
DUF3342 domain-containing protein.
   
   0.569
KP79_PYT23567
Tubulin epsilon chain; Belongs to the tubulin family.
    
 0.491
KP79_PYT12641
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.491
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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