Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KP79_PYT02284Bcl-2-like protein 13. (688 aa)    
Predicted Functional Partners:
KP79_PYT20886
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
      
 0.712
KP79_PYT20165
FUN14 domain-containing protein 1.
      
 0.709
KP79_PYT06638
Activating molecule in BECN1-regulated autophagy protein 1.
      
 0.707
KP79_PYT04974
Tax1-binding protein 1-like.
      
 0.690
KP79_PYT15348
Peptidylprolyl isomerase.
      
 0.650
KP79_PYT21541
Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.625
KP79_PYT00210
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3.
    
 
 0.608
KP79_PYT21150
Beclin-1.
      
 0.555
KP79_PYT06264
Nucleoredoxin.
      
 0.555
KP79_PYT08945
FAS-associated factor 1.
      
 0.495
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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