STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT02277Methyltransf_11 domain-containing protein. (297 aa)    
Predicted Functional Partners:
KP79_PYT09651
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.973
KP79_PYT14637
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.803
KP79_PYT18474
40S ribosomal protein S10.
   
 0.802
KP79_PYT09054
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.800
KP79_PYT12227
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.796
KP79_PYT18002
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.796
KP79_PYT23830
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.792
KP79_PYT08497
Protein DBF4-like A.
   
 0.789
KP79_PYT22167
40S ribosomal protein S19.
   
 0.788
KP79_PYT16215
40S ribosomal protein S23.
   
 0.780
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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