Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT21667Signal recognition particle receptor subunit beta. (258 aa)    
Predicted Functional Partners:
KP79_PYT22548
Signal recognition particle receptor subunit alpha.
  
 0.994
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.918
KP79_PYT06396
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 
 0.911
KP79_PYT17397
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 
 0.897
KP79_PYT00464
Signal recognition particle 19 kDa protein.
   
 
 0.869
KP79_PYT08861
Histone H2A deubiquitinase MYSM1.
      
 0.860
KP79_PYT06702
Translocation protein SEC63-like.
   
 
 0.857
KP79_PYT09563
Signal recognition particle 14 kDa protein.
   
  
 0.819
KP79_PYT00404
Protein transport protein Sec61 subunit alpha isoform 2; Belongs to the SecY/SEC61-alpha family.
   
 0.808
KP79_PYT17535
DDRGK domain-containing protein 1.
   
 
 0.807
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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