Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT05511Solute carrier family 15 member 4. (581 aa)    
Predicted Functional Partners:
KP79_PYT05222
Charged multivesicular body protein 6.
    
   0.574
KP79_PYT06235
Protein Njmu-R1.
    
   0.496
KP79_PYT11422
HAUS augmin-like complex subunit 5.
     
  0.480
KP79_PYT21770
NAD kinase.
     
  0.480
KP79_PYT17043
Zinc transporter ZIP13.
    
 
 0.479
KP79_PYT19303
ATP-dependent RNA helicase DDX11.
 
      0.460
KP79_PYT03252
Serine/threonine-protein kinase 24.
      
 0.456
KP79_PYT06276
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
     
  0.445
KP79_PYT05734
Ribosome biogenesis protein BMS1-like.
      
 0.440
KP79_PYT14663
Peroxisomal NADH pyrophosphatase NUDT12.
    
  0.437
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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