KP79_PYT22351 protein (Mizuhopecten yessoensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KP79_PYT22351

Solute carrier family 40 member 1. (740 aa)

Predicted Functional Partners:

KP79_PYT19280

0.905

KP79_PYT17351

0.617

KP79_PYT17475

0.617

KP79_PYT00518

0.514

KP79_PYT18108

0.513

KP79_PYT19887

0.445

KP79_PYT19886

0.445

Your Current Organism:

Mizuhopecten yessoensis

NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KP79_PYT00518	KP79_PYT17351	R4JTN2	A0A210PY95	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	Hephaestin; Belongs to the multicopper oxidase family.	0.906
KP79_PYT00518	KP79_PYT19280	R4JTN2	A0A210PGF2	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.514
KP79_PYT00518	KP79_PYT19886	R4JTN2	A0A210PS99	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	Natural resistance-associated macrophage protein 2.	0.510
KP79_PYT00518	KP79_PYT19887	R4JTN2	A0A210PS89	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	Natural resistance-associated macrophage protein 2.	0.510
KP79_PYT00518	KP79_PYT22351	R4JTN2	A0A210PVD4	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	Solute carrier family 40 member 1.	0.514
KP79_PYT17351	KP79_PYT00518	A0A210PY95	R4JTN2	Hephaestin; Belongs to the multicopper oxidase family.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	0.906
KP79_PYT17351	KP79_PYT19280	A0A210PY95	A0A210PGF2	Hephaestin; Belongs to the multicopper oxidase family.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.617
KP79_PYT17351	KP79_PYT22351	A0A210PY95	A0A210PVD4	Hephaestin; Belongs to the multicopper oxidase family.	Solute carrier family 40 member 1.	0.617
KP79_PYT17475	KP79_PYT19280	A0A210QLJ7	A0A210PGF2	Hephaestin.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.617
KP79_PYT17475	KP79_PYT22351	A0A210QLJ7	A0A210PVD4	Hephaestin.	Solute carrier family 40 member 1.	0.617
KP79_PYT18108	KP79_PYT19280	A0A210Q883	A0A210PGF2	Thymidylate synthase.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.513
KP79_PYT18108	KP79_PYT22351	A0A210Q883	A0A210PVD4	Thymidylate synthase.	Solute carrier family 40 member 1.	0.513
KP79_PYT19280	KP79_PYT00518	A0A210PGF2	R4JTN2	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	0.514
KP79_PYT19280	KP79_PYT17351	A0A210PGF2	A0A210PY95	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Hephaestin; Belongs to the multicopper oxidase family.	0.617
KP79_PYT19280	KP79_PYT17475	A0A210PGF2	A0A210QLJ7	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Hephaestin.	0.617
KP79_PYT19280	KP79_PYT18108	A0A210PGF2	A0A210Q883	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Thymidylate synthase.	0.513
KP79_PYT19280	KP79_PYT19886	A0A210PGF2	A0A210PS99	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Natural resistance-associated macrophage protein 2.	0.445
KP79_PYT19280	KP79_PYT19887	A0A210PGF2	A0A210PS89	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Natural resistance-associated macrophage protein 2.	0.445
KP79_PYT19280	KP79_PYT22351	A0A210PGF2	A0A210PVD4	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Solute carrier family 40 member 1.	0.905
KP79_PYT19886	KP79_PYT00518	A0A210PS99	R4JTN2	Natural resistance-associated macrophage protein 2.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.	0.510