STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT19009Mucin-5B. (8076 aa)    
Predicted Functional Partners:
KP79_PYT16690
Nucleoporin GLE1.
    
 0.626
KP79_PYT04569
Nuclear pore complex protein Nup214.
    
 0.603
KP79_PYT18220
Nuclear pore complex protein Nup50.
     
 0.595
KP79_PYT19875
Aladin.
    
 0.594
KP79_PYT07969
mRNA export factor.
    
 0.572
KP79_PYT16781
Nuclear pore complex protein Nup88.
     
 0.570
KP79_PYT13430
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.555
KP79_PYT14137
Nuclear pore protein.
     
 0.554
KP79_PYT09027
Nuclear pore complex protein Nup153.
     
 0.553
KP79_PYT13267
Nuclear pore complex protein Nup98-Nup96.
     
 0.553
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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