Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KP79_PYT19966Collagen alpha-1(XVII) chain; Belongs to the tumor necrosis factor family. (374 aa)    
Predicted Functional Partners:
KP79_PYT19438
Mitogen-activated protein kinase kinase kinase MLT.
    
 
 0.844
KP79_PYT07095
Mitogen-activated protein kinase kinase kinase 7.
    
 
 0.844
KP79_PYT06937
Dual specificity protein phosphatase 16.
    
 0.843
KP79_PYT09553
Dual specificity protein phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 0.843
MKK7
Dual specificity mitogen-activated protein kinase kinase 7.
    
 
 0.835
KP79_PYT20688
Glypican-6; Belongs to the glypican family.
      
 0.591
KP79_PYT05982
DNA ligase.
    
 0.582
KP79_PYT18460
TNFR-Cys domain-containing protein.
    
 0.582
KP79_PYT11344
Mucolipin-2.
      
 0.556
KP79_PYT05455
Hepatocyte growth factor-regulated tyrosine kinase substrate.
      
 0.510
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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