Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KP79_PYT19976Arginine and glutamate-rich protein 1-A. (258 aa)    
Predicted Functional Partners:
KP79_PYT17537
Poly(U)-binding-splicing factor PUF60.
   
   0.748
KP79_PYT18302
U1 small nuclear ribonucleoprotein 70 kDa.
   
 
 0.717
KP79_PYT15347
U11/U12 small nuclear ribonucleoprotein 35 kDa protein.
   
 
 0.717
KP79_PYT08831
Splicing regulatory glutamine/lysine-rich protein 1.
   
 
 0.696
KP79_PYT05249
Luc7-like protein 3.
   
  
 0.672
KP79_PYT10878
SRSF protein kinase 1.
   
 
 0.650
KP79_PYT12452
Armadillo repeat-containing protein 3.
    
 
 0.639
KP79_PYT08658
Calcium homeostasis endoplasmic reticulum protein.
   
   0.605
KP79_PYT10547
Uncharacterized protein.
   
   0.603
KP79_PYT14128
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.587
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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